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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T XRCC6 chr22:42017123-42060052:+ 0.78 9.09 2.64E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T ZBED4 chr22:50247490-50283726:+ 0.61 7.63 1.24E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T ZC3H7B chr22:41697526-41756151:+ 0.67 7.1 4.69E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T ZDHHC8 chr22:20116979-20135530:+ 0.63 7.13 3.77E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T ZMAT5 chr22:30126945-30163000:- 0.62 9.12 2.06E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T ZNF74 chr22:20748405-20762751:+ 0.74 7.02 7.75E-12 Box Plot
THCA rs599962 chr11:77575639 C/T INTS4L1 chr7:64601603-64694600:+ 0.43 7.73 6.2E-14 Box Plot
THCA rs6000100 chr22:36467502 G/T EFCAB6 chr22:43924624-44208217:- 0.31 6.1 2.23E-9 Box Plot
THCA rs6000100 chr22:36467502 G/T PHF5A chr22:41855721-41864729:- 0.35 5.97 4.61E-9 Box Plot
THCA rs6000100 chr22:36467502 G/T POLR2F chr22:38348614-38437922:+ 0.3 6.27 8.25E-10 Box Plot
THCA rs6000100 chr22:36467502 G/T ST13 chr22:41220539-41253026:- 0.37 6.25 9.22E-10 Box Plot
THCA rs6000100 chr22:36467502 G/T TOMM22 chr22:39077953-39081426:+ 0.37 6.25 9.33E-10 Box Plot
THCA rs60027424 chr8:11789027 C/A SGK223 chr8:8175258-8244008:- -0.44 -8.28 1.23E-15 Box Plot
THCA rs6002934 chr22:43138403 A/G EIF3L chr22:38244875-38285414:+ -0.74 -6.23 9.96E-10 Box Plot
THCA rs6003555 chr22:23554311 A/G CRKL chr22:21271714-21308037:+ -0.61 -6.27 8.24E-10 Box Plot